Enhancing survival and subsequent infectivity of conidia of potential mycoherbistats using UV protectants

Ultraviolet radiation (UV) can reduce the effectiveness of fungi used for biological control; therefore, this study examined the photostabilising effect of water- and oil-soluble UV protectants on conidium germination of Plectosporium alismatis and Colletotrichum orbiculare, pathogens with potential as biocontrol agents, and the ability of conidia of C. orbiculare to cause disease. Formulation in riboflavin (1%), proline (1%), propyl gallate (1%), melanin (0.1%) and ascorbic acid (5%) increased the germination of UVB-exposed conidia of P. alismatis to levels found in the dark control without causing a delay in germination. Formulation in (a) pyridoxin (5%), (b) an nC24 mineral oil (5%), and (c) ECCO 1422 (5% in the mineral oil) also resulted in germination similar to the control but germination was delayed. Protection was provided to conidia of C. orbiculare treated with 1% aqueous solutions of proline and folic acid in vitro. Formulation of conidia of C. orbiculare in a 5% aqueous emulsion of the mineral oil and aqueous solutions of melanin (0.01%), proline and tyrosine (both at 1%) significantly increased anthracnose development above control levels on leaf discs of Xanthium spinosum exposed to UVB dose of 16.7 kJ m^-2. After exposure to natural sunlight at a UVB dose of 2.2 kJ m^-2, anthracnose development was greater on leaf discs inoculated with conidia of C. orbiculare formulated in 1% aqueous solutions of ascorbic acid (1%), proline (1%), tyrosine (1%) and melanin (0.01%), or in 5% aqueous emulsions of a canola-derived oil and the mineral oil than by conidia formulated in water alone. Therefore, a range of compounds can provide conidia with protection from UVB. Of these, propyl gallate and oils similar to the mineral oil are likely to be cost effective. Such formulations can be combined with suitable application times to increase mycoherbisitat efficiency.     

Alleviation of chromium toxicity in rice seedlings by applying exogenous glutathione

The effect of exogenous reduced glutathione (GSH) on alleviation of hexavalent chromium (Cr⁶⁺) toxicity to rice seedlings and its physiological mechanisms were comprehensively investigated in a series of experiments. Our results showed that growth and nutrient uptake of rice seedlings were dramatically reduced under 100 μM Cr⁶⁺ stress, and the reduction was significantly alleviated by exogenous GSH. Cr⁶⁺ stress also reduced cell viability in root tips and damaged ultrastructure of both chloroplasts and root cells, while the addition of GSH alleviates those negative effects. Cr-induced toxicity and GSH-caused Cr alleviation differed significantly between Cr-tolerant Line 117 (L117) and Cr-sensitive Line 41 (L41). Under Cr⁶⁺ stress, cystine content was increased and GSH content was decreased in rice plants, exogenous GSH, however, mitigated the Cr-toxicity by reversing the Cr-induced changes of the two compounds. The types of Cr-induced secretion of organic acids varied between the genotypes, where reduction in the contents of acetic and lactic acids and tartaric and malic acids were observed in L117 and L41, respectively. The addition of GSH alleviated the reduction of secretion of these organic acids. Exogenous GSH also altered the forms of Cr ions in the rhizosphere and the fraction of distribution at subcellular level in both shoots and roots. It may be concluded that the alleviation of Cr⁶⁺ toxicity by exogenous GSH is directly attributed to its regulation on forms of Cr ions in rhizosphere and their distribution at subcellular levels.     

Combined effect of gamma radiation,hot water and sodium bicarbonate on quality and chemical constituents of stored mandarin fruits

The combined effect of gamma radiation and both hot water and sodium carbonate on physiological decay and chemical constituents of stored mandarin fruits was investigated in this work. In this consideration, the studied fruits were gamma irradiated at doses of 0, 0.3, 0.6, 1.2 and 2.4 KGy. Then, the irradiated and non-irradiated fruits were treated either by hot water or sodium bicarbonate to examine their capacity to give a further maintenance and increasing shelf life or storage periods of mandarin. Treated and non-treated fruit samples were taken at intervals of 10 days and up to 60 days. Physiological decay, total acidity, vitamin C, total sugars and TSS were investigated during the different intervals. Gamma radiation treatments showed a promising effect for maintaining the studied fruits and retarding the development of decay. On the other hand, applying both hot water and sodium bicarbonate as a further combined treatments induced a powerful effect on delaying decay development, keeping the chemical constituents near to the normal level and in turn maximizing shelf life and storage periods of the fruits under investigation.     

Isolation and characterization of halotolerant Streptomyces radiopugnans from Antarctica soil

An actinomycete wild strain PM0626271 (= MTCC 5447), producing novel antibacterial compounds, was isolated from soil collected from Antarctica. The taxonomic status of the isolate was established by polyphasic approach. Scanning electron microscopy observations and the presence of LL‐Diaminopimelic acid in the cell wall hydrolysate confirmed the genus Streptomyces. Analysis of 16S rRNA gene sequence showed highest sequence similarity to Streptomyces radiopugnans (99%). The phylogenetic tree constructed using near complete 16S rRNA gene sequences of the isolate and closely related strains revealed that although the isolate fell within the S. radiopugnans gene subclade, it was allocated a different branch in the phylogenetic tree, separating it from the majority of the radiopugnans strains. Similar to type strain, S. radiopugnans R97^T, the Antarctica isolate displayed thermo tolerance as well as resistance to ⁶⁰Co gamma radiation, up to the dose of 15 kGy. However, media and salt tolerance studies revealed that, unlike the type strain, this isolate needed higher salinity for its growth. This is the first report of S. radiopugnans isolated from the Antarctica region. The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of Streptomyces radiopugnans MTCC 5447 is JQ723477 .

Significance and Impact of the Study

The study presents the first report of isolation of Streptomyces radiopugnans from Antarctica. To date, there is only one publication regarding S. radiopugnans R97^T isolated from radiation‐polluted soil. Like the type strain, Antarctica isolate was thermotolerant and radiotolerant, but in addition, it required salts for growth and did not degrade phenol. We envisaged that metabolic pattern of the same species varies based on acclimatization in its native ecological habitat. Additionally, Antarctica isolate had produced novel antibacterial compounds (patent‐US2012/0156295). The study highlighted that least explored extreme regions like Antarctica are rich resources of novel microbial strains producing novel bioactive compounds.     

Differential spreading of HinfI satellite DNA variants during radiation in Centaureinae

Background and Aims

Subtribe Centaureinae appears to be an excellent model group in which to analyse satellite DNA and assess the influence that the biology and/or the evolution of different lineages have had on the evolution of this class of repetitive DNA. Phylogenetic analyses of Centaureinae support two main phases of radiation, leading to two major groups of genera of different ages. Furthermore, different modes of evolution are observed in different lineages, reflected by morphology and DNA sequences.

Methods

The sequences of 502 repeat units of the HinfI satellite DNA family from 38 species belonging to ten genera of Centaureinae were isolated and compared. A phylogenetic reconstruction was carried out by maximum likelihood and Bayesian inference.

Key Results

Up to eight different HinfI subfamilies were found, based on the presence of a set of diagnostic positions given by a specific mutation shared by all the sequences of one group. Subfamilies V–VIII were mostly found in older genera (first phase of radiation in the subtribe, late Oligocene–Miocene), although some copies of these types of repeats were also found in some species of the derived genera. Subfamilies I–IV spread mostly in species of the derived clade (second phase of radiation, Pliocene to Pleistocene), although repeats of these subfamilies exist in older species. Phylogenetic trees did not group the repeats by taxonomic affinity, but sequences were grouped by subfamily provenance. Concerted evolution was observed in HinfI subfamilies spread in older genera, whereas no genetic differentiation was found between species, and several subfamilies even coexist within the same species, in recently radiated groups or in groups with a history of recurrent hybridization of lineages.

Conclusions

The results suggest that the eight HinfI subfamilies were present in the common ancestor of Centaureinae and that each spread differentially in different genera during the two main phases of radiation following the library model of satellite DNA evolution. Additionally, differential speciation pathways gave rise to differential patterns of sequence evolution in different lineages. Thus, the evolutionary history of each group of Centaureinae is reflected in HinfI satellite DNA evolution. The data reinforce the value of satellite DNA sequences as markers of evolutionary processes.     

Towards a new classification of the giant paraphyletic genus Cyperus (Cyperaceae): phylogenetic relationships and generic delimitation in C4 Cyperus

Maximum likelihood and Bayesian inference analyses of nuclear ribosomal DNA (ETS1f) and plastid DNA (rpl32‐trnL, trnH‐psbA) sequence data are presented for ‘C₄ Cyperus’ (Cyperaceae). The term ‘C₄ Cyperus’ encompasses all species of Cyperus s.l. that use C₄ photosynthesis linked with chlorocyperoid vegetative anatomy. Sampling comprises 107 specimens of 104 different taxa, including many of the subdivisions of C₄ Cyperus s.s. and all C₄ segregate genera (Alinula, Ascolepis, Kyllinga, Lipocarpha, Pycreus, Queenslandiella, Remirea, Sphaerocyperus and Volkiella). According to our results, C₄ Cyperus is a well‐supported monophyletic clade nested in C₃ Cyperus. Despite the lack of resolution along the backbone of the C₄ Cyperus clade and for some internal branches, several well‐supported clades can be distinguished. The first clade in C₄ Cyperus is formed by Cyperus cuspidatus and C. waterloti. Other recognizable and well‐supported clades correspond to segregate genera, i.e. Ascolepis, Lipocarpha including Volkiella, and Kyllinga. Species of C₄ Cyperus s.s. form a core grade in which the C₄ segregate genera are embedded. Pycreus, the largest segregate genus composed of c. 120 species, is not monophyletic as it includes several C₄ species of Cyperus s.s. This study establishes a phylogenetic framework for revising the classification and character evolution in Cyperus s.l. © 2013 The Linnean Society of London     

Preconditioning of leaves by solar radiation and anoxia affects microbial colonisation and rate of leaf mass loss in an intermittent stream

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THERMOREGULATORY EFFECT IN HUMANS OF SUPPRESSED ENDOGENOUS MELATONIN BY PRE-SLEEP BRIGHT-LIGHT EXPOSURE IN A COLD ENVIRONMENT

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Immunoassay Using Microfluid Filters Constructed by Deep X-Ray Lithography

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